PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla021101
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family ERF
Protein Properties Length: 229aa    MW: 25346.9 Da    PI: 5.8514
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla021101genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.5e-1951100356
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                ++GVr +  +g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++aa+++++g+
  Cla021101  51 FRGVRKRN-WGKWVSEIREPRK---KTRIWLGTYPTPEMAARAHDAAALAIKGH 100
                8****887.**********843...6************************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.83E-2150108IPR016177DNA-binding domain
SMARTSM003804.6E-3450113IPR001471AP2/ERF domain
PROSITE profilePS5103223.14350107IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-3150108IPR001471AP2/ERF domain
PRINTSPR003677.4E-105162IPR001471AP2/ERF domain
CDDcd000181.60E-1951109No hitNo description
PfamPF008478.7E-1451100IPR001471AP2/ERF domain
PRINTSPR003677.4E-107389IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MEPFFNYIEA SDAKATTFCN SASITTHEYQ QVSKNRKQRS TQENRDHHPM FRGVRKRNWG  60
KWVSEIREPR KKTRIWLGTY PTPEMAARAH DAAALAIKGH SAFLNFPELA QFLPRPLSRS  120
HKDIQAAAAQ AAAATFSAGS DAEGGGGEAA EESRETLFPG SDGGDRTEDS TNSLSTAAGD  180
ETLFDLPDLF VGSSDLKDGF VYHSSLWQFC AAADHNGFRL EEPSFWELI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A1e-1351107663ATERF1
2gcc_A1e-1351107663ATERF1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818480.0LN681848.1 Cucumis melo genomic scaffold, anchoredscaffold00006.
GenBankLN7132600.0LN713260.1 Cucumis melo genomic chromosome, chr_6.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004134290.11e-130PREDICTED: ethylene-responsive transcription factor ERF039
SwissprotQ8LBQ79e-57ERF34_ARATH; Ethylene-responsive transcription factor ERF034
TrEMBLA0A0A0L8C61e-130A0A0A0L8C6_CUCSA; Uncharacterized protein
STRINGPOPTR_0014s05500.16e-60(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19234263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.17e-42ERF family protein